Visualization Chromatin Viewer Gene Set Analysis Data Mining Analysis Suite

Welcome to the Ceres homepage
Ceres provides tools for the integrated analysis of transcription factor (TF) binding sites and nucleosome data sets in Saccharomyces cerevisiae.
  • Visualization tool to graphically display TF binding sites and positioned nucleosomes in promoter sequences
  • Transcription factor binding site enrichment tool to identify statistically over-represented TF sites, and TF site chromatin environments, occurring in a selected set of promoters
  • Chromatin Viewer tool to display trends of nucleosome organization among selected gene sets
  • Data mining tools to select promoters based on TF binding sites, GO terms, and genome subsets
  • Advanced data mining tools to identify promoters based on TF binding site chromatin environments

Select a tool
Visualization: Display TF binding sites and nucleosome organization of up to 100 promoter regions
Chromatin Viewer: Display trend of nucleosome organization in user selected genes
Gene Set Analysis: Identify enriched or depleted TF binding sites, chromatin environments, or GO terms among large gene lists
Data Mining: Select sets of promoter sequences by common transcription factors or common Gene Ontology terms
Analysis suite: High-powered data mining, visualization, and our full suite of analysis tools

Updated: 2005: PM, 15 Jun 2009 © 2008 Robert Morris, Timothy Ryan O'Connor, and John J. Wyrick . All rights reserved Contact: John Wyrick
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